G3P225_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3P225_GASAC

Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (210 aa)

Predicted Functional Partners:

G3PU42_GASAC

0.712

G3PZG4_GASAC

0.704

G3P3N3_GASAC

0.689

G3N492_GASAC

0.685

G3P3N0_GASAC

0.678

G3P3Q5_GASAC

0.672

G3N6J2_GASAC

0.670

G3P2L7_GASAC

0.669

G3PU45_GASAC

0.665

G3NFF4_GASAC

0.662

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N492_GASAC	G3N6J2_GASAC	ENSGACP00000000112	ENSGACP00000000917	Si:dkey-202e17.1.	Uncharacterized protein.	0.844
G3N492_GASAC	G3NFF4_GASAC	ENSGACP00000000112	ENSGACP00000004056	Si:dkey-202e17.1.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.905
G3N492_GASAC	G3P225_GASAC	ENSGACP00000000112	ENSGACP00000011648	Si:dkey-202e17.1.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.685
G3N492_GASAC	G3P2L7_GASAC	ENSGACP00000000112	ENSGACP00000011840	Si:dkey-202e17.1.	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	0.789
G3N492_GASAC	G3PZG4_GASAC	ENSGACP00000000112	ENSGACP00000023004	Si:dkey-202e17.1.	C1GALT1-specific chaperone 1.	0.900
G3N6J2_GASAC	G3N492_GASAC	ENSGACP00000000917	ENSGACP00000000112	Uncharacterized protein.	Si:dkey-202e17.1.	0.844
G3N6J2_GASAC	G3NFF4_GASAC	ENSGACP00000000917	ENSGACP00000004056	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.909
G3N6J2_GASAC	G3P225_GASAC	ENSGACP00000000917	ENSGACP00000011648	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.670
G3N6J2_GASAC	G3P2L7_GASAC	ENSGACP00000000917	ENSGACP00000011840	Uncharacterized protein.	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	0.842
G3N6J2_GASAC	G3PU42_GASAC	ENSGACP00000000917	ENSGACP00000021129	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.432
G3N6J2_GASAC	G3PZG4_GASAC	ENSGACP00000000917	ENSGACP00000023004	Uncharacterized protein.	C1GALT1-specific chaperone 1.	0.912
G3NFF4_GASAC	G3N492_GASAC	ENSGACP00000004056	ENSGACP00000000112	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Si:dkey-202e17.1.	0.905
G3NFF4_GASAC	G3N6J2_GASAC	ENSGACP00000004056	ENSGACP00000000917	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.909
G3NFF4_GASAC	G3P225_GASAC	ENSGACP00000004056	ENSGACP00000011648	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.662
G3NFF4_GASAC	G3P2L7_GASAC	ENSGACP00000004056	ENSGACP00000011840	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	0.909
G3NFF4_GASAC	G3PZG4_GASAC	ENSGACP00000004056	ENSGACP00000023004	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	C1GALT1-specific chaperone 1.	0.906
G3P225_GASAC	G3N492_GASAC	ENSGACP00000011648	ENSGACP00000000112	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Si:dkey-202e17.1.	0.685
G3P225_GASAC	G3N6J2_GASAC	ENSGACP00000011648	ENSGACP00000000917	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein.	0.670
G3P225_GASAC	G3NFF4_GASAC	ENSGACP00000011648	ENSGACP00000004056	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.662
G3P225_GASAC	G3P2L7_GASAC	ENSGACP00000011648	ENSGACP00000011840	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.	0.669