STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P3E9_GASACRing finger protein 13. (379 aa)    
Predicted Functional Partners:
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.753
G3PCG6_GASAC
Ribosomal protein S27a.
    
  0.753
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 0.706
G3Q985_GASAC
Ubiquitin thioesterase.
    
 0.706
CSKMT
Citrate synthase lysine methyltransferase.
    
 0.706
G3QA52_GASAC
Ubiquitin B.
   
  0.683
G3QC58_GASAC
Ubiquitin carboxyl-terminal hydrolase.
   
 0.609
G3NDF4_GASAC
Ubiquitin carboxyl-terminal hydrolase.
    
 0.597
G3NMU6_GASAC
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.597
G3P695_GASAC
Ubiquitin carboxyl-terminal hydrolase.
    
 0.597
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.