STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P582_GASACApolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2b. (248 aa)    
Predicted Functional Partners:
G3P7F7_GASAC
Apobec1 complementation factor.
     
 0.739
G3PUW8_GASAC
RNA binding motif protein 47.
     
 0.714
G3PT18_GASAC
Microtubule associated monooxygenase, calponin and LIM domain containing 2a.
   
    0.683
G3P8J1_GASAC
Activation-induced cytidine deaminase.
     
0.620
G3Q7U2_GASAC
Uncharacterized protein.
   
    0.616
G3NKT7_GASAC
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
   
  
 0.582
G3P642_GASAC
Cardiomyopathy associated 5.
   
    0.581
G3N5B8_GASAC
RNA binding motif protein 46.
     
 0.573
G3NFV4_GASAC
Heterogeneous nuclear ribonucleoprotein R.
     
 0.573
G3P3A2_GASAC
Synaptotagmin binding, cytoplasmic RNA interacting protein, like.
     
 0.573
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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