STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P5N1_GASACZinc finger protein 143b. (625 aa)    
Predicted Functional Partners:
G3PC67_GASAC
Uncharacterized protein.
    
  0.848
G3PC70_GASAC
Uncharacterized protein.
    
  0.848
G3PC74_GASAC
Uncharacterized protein.
    
  0.848
G3NAI4_GASAC
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.796
G3Q067_GASAC
Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.
   
 
 0.792
G3NG30_GASAC
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.765
G3NU10_GASAC
Sp1 transcription factor.
    
 
0.761
G3PDI2_GASAC
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.758
G3PG18_GASAC
Uncharacterized protein.
   
 0.758
G3NPN1_GASAC
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.757
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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