STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P6Q3_GASACBicC family RNA binding protein 1a. (971 aa)    
Predicted Functional Partners:
G3P644_GASAC
Terminal nucleotidyltransferase 2.
   
 
 0.649
G3NA26_GASAC
Mitochondrial poly(A) polymerase.
   
 
 0.606
TUT7
Terminal uridylyl transferase 7.
   
 
 0.606
G3NNW0_GASAC
Uncharacterized protein.
   
 
 0.606
G3P6D7_GASAC
Terminal uridylyl transferase 1, U6 snRNA-specific.
   
 
 0.606
G3PC82_GASAC
CCR4-NOT transcription complex, subunit 3a.
    
 
 0.517
G3PMF6_GASAC
Cugbp, Elav-like family member 1.
   
 
 0.493
G3NQE2_GASAC
Pumilio RNA-binding family member 1.
   
 
 0.488
G3P589_GASAC
Pumilio RNA-binding family member 2.
   
 
 0.488
G3N826_GASAC
CUGBP Elav-like family member 2.
   
 
 0.474
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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