STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P6U3_GASACCoproporphyrinogen oxidase. (436 aa)    
Predicted Functional Partners:
G3PMY2_GASAC
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 0.956
G3NJJ7_GASAC
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.949
ENDOV
Endonuclease V.
  
 0.943
G3N8M7_GASAC
HemK methyltransferase family member 1.
  
 
 0.882
G3PMI7_GASAC
N-6 adenine-specific DNA methyltransferase 1.
  
 
 0.882
G3Q1V4_GASAC
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
  
  
 0.803
G3PTK9_GASAC
2-oxoglutarate and iron-dependent oxygenase domain containing 1.
   
  
 0.743
G3NNC7_GASAC
Hydroxymethylbilane synthase a.
  
  
 0.733
G3Q4Q9_GASAC
Triokinase/FMN cyclase.
   
    0.714
G3NLR2_GASAC
Squalene epoxidase a.
  
  
 0.696
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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