G3P7C5_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3P7C5_GASAC

Tyrosine-protein kinase. (537 aa)

Predicted Functional Partners:

SHC3

0.892

G3NRM5_GASAC

0.891

G3Q3Q4_GASAC

0.891

G3N7A2_GASAC

0.889

G3P3G6_GASAC

0.889

G3NRF1_GASAC

0.881

G3P3H5_GASAC

0.881

G3PCE7_GASAC

0.881

CTNND1

0.878

G3Q3F0_GASAC

0.878

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTNND1	G3NRF1_GASAC	ENSGACP00000023580	ENSGACP00000007918	Catenin delta 1.	Uncharacterized protein.	0.777
CTNND1	G3NRM5_GASAC	ENSGACP00000023580	ENSGACP00000007992	Catenin delta 1.	Catenin (cadherin-associated protein), beta 1.	0.908
CTNND1	G3P7C5_GASAC	ENSGACP00000023580	ENSGACP00000013499	Catenin delta 1.	Tyrosine-protein kinase.	0.878
CTNND1	G3Q3F0_GASAC	ENSGACP00000023580	ENSGACP00000024402	Catenin delta 1.	Catenin (cadherin-associated protein), delta 1.	0.843
G3N7A2_GASAC	G3NRF1_GASAC	ENSGACP00000001179	ENSGACP00000007918	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Uncharacterized protein.	0.625
G3N7A2_GASAC	G3NRM5_GASAC	ENSGACP00000001179	ENSGACP00000007992	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Catenin (cadherin-associated protein), beta 1.	0.732
G3N7A2_GASAC	G3P3H5_GASAC	ENSGACP00000001179	ENSGACP00000012148	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.992
G3N7A2_GASAC	G3P7C5_GASAC	ENSGACP00000001179	ENSGACP00000013499	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	Tyrosine-protein kinase.	0.889
G3NRF1_GASAC	CTNND1	ENSGACP00000007918	ENSGACP00000023580	Uncharacterized protein.	Catenin delta 1.	0.777
G3NRF1_GASAC	G3N7A2_GASAC	ENSGACP00000007918	ENSGACP00000001179	Uncharacterized protein.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.625
G3NRF1_GASAC	G3NRM5_GASAC	ENSGACP00000007918	ENSGACP00000007992	Uncharacterized protein.	Catenin (cadherin-associated protein), beta 1.	0.855
G3NRF1_GASAC	G3P3G6_GASAC	ENSGACP00000007918	ENSGACP00000012139	Uncharacterized protein.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.625
G3NRF1_GASAC	G3P3H5_GASAC	ENSGACP00000007918	ENSGACP00000012148	Uncharacterized protein.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.557
G3NRF1_GASAC	G3P7C5_GASAC	ENSGACP00000007918	ENSGACP00000013499	Uncharacterized protein.	Tyrosine-protein kinase.	0.881
G3NRF1_GASAC	G3Q3F0_GASAC	ENSGACP00000007918	ENSGACP00000024402	Uncharacterized protein.	Catenin (cadherin-associated protein), delta 1.	0.778
G3NRM5_GASAC	CTNND1	ENSGACP00000007992	ENSGACP00000023580	Catenin (cadherin-associated protein), beta 1.	Catenin delta 1.	0.908
G3NRM5_GASAC	G3N7A2_GASAC	ENSGACP00000007992	ENSGACP00000001179	Catenin (cadherin-associated protein), beta 1.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.732
G3NRM5_GASAC	G3NRF1_GASAC	ENSGACP00000007992	ENSGACP00000007918	Catenin (cadherin-associated protein), beta 1.	Uncharacterized protein.	0.855
G3NRM5_GASAC	G3P3G6_GASAC	ENSGACP00000007992	ENSGACP00000012139	Catenin (cadherin-associated protein), beta 1.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.732
G3NRM5_GASAC	G3P3H5_GASAC	ENSGACP00000007992	ENSGACP00000012148	Catenin (cadherin-associated protein), beta 1.	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family.	0.604