STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P7W8_GASACATP-binding cassette, sub-family D (ALD), member 4. (560 aa)    
Predicted Functional Partners:
G3NRH6_GASAC
LMBR1 domain containing 1.
    
 0.947
G3Q0T3_GASAC
Peroxisomal biogenesis factor 19.
    
 0.927
G3PF23_GASAC
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
    
 
 0.913
G3N4W1_GASAC
ATP-binding cassette, sub-family D (ALD), member 1.
  
0.908
G3Q5K5_GASAC
ATP-binding cassette, sub-family D (ALD), member 2.
   
0.901
G3PE42_GASAC
Peroxisomal biogenesis factor 3.
   
 0.849
G3N486_GASAC
ATP-binding cassette, sub-family D (ALD), member 3a.
     
0.845
G3NMN4_GASAC
RAD51 paralog B.
    
 
 0.819
G3QCE3_GASAC
RAD51 paralog D.
    
 
 0.819
G3PYX4_GASAC
Peroxisomal membrane protein PEX16.
     
 0.798
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.