STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P8B8_GASACRNA binding motif protein 5. (821 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
0.851
G3NEV4_GASAC
RNA helicase.
    
 0.799
G3PT86_GASAC
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
   
 0.766
G3N9R6_GASAC
RNA helicase.
    
 0.765
DHX15
DEAH-box helicase 15.
   
 0.745
G3Q7K1_GASAC
DEAH (Asp-Glu-Ala-His) box helicase 15.
   
 0.744
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.738
G3NDN9_GASAC
DEAH (Asp-Glu-Ala-His) box polypeptide 32a.
    
 0.732
G3Q3K4_GASAC
DEAQ box RNA-dependent ATPase 1.
    
 0.732
G3P7P0_GASAC
Nucleolar protein 6.
    
 
 0.730
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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