STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3P8N7_GASACFamily with sequence similarity 120C. (907 aa)    
Predicted Functional Partners:
G3QBW4_GASAC
Interleukin 13 receptor, alpha 2.
      
 0.499
G3PV90_GASAC
SUN domain-containing protein.
      
 0.485
NUP54
Nucleoporin 54.
      
 0.467
G3PZB0_GASAC
Ring finger and CCCH-type domains 2.
    
   0.420
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.404
G3PS70_GASAC
Uncharacterized protein.
    
 
 0.404
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.