G3P8W1_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3P8W1_GASAC

Si:dkey-17m8.1. (328 aa)

Predicted Functional Partners:

G3Q6L0_GASAC

0.885

MAP2K4

0.834

G3Q1Y1_GASAC

0.832

G3NYY9_GASAC

0.782

G3PGY1_GASAC

0.782

G3NQF0_GASAC

0.728

G3NVN6_GASAC

0.728

G3PVL6_GASAC

0.728

G3NL88_GASAC

0.703

G3NLX7_GASAC

0.674

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NL88_GASAC	G3NQF0_GASAC	ENSGACP00000006101	ENSGACP00000007566	ADP-ribosylation factor-like 15a.	Mitogen-activated protein kinase.	0.537
G3NL88_GASAC	G3NVN6_GASAC	ENSGACP00000006101	ENSGACP00000009405	ADP-ribosylation factor-like 15a.	Mitogen-activated protein kinase.	0.537
G3NL88_GASAC	G3P8W1_GASAC	ENSGACP00000006101	ENSGACP00000014035	ADP-ribosylation factor-like 15a.	Si:dkey-17m8.1.	0.703
G3NL88_GASAC	G3PVL6_GASAC	ENSGACP00000006101	ENSGACP00000021655	ADP-ribosylation factor-like 15a.	Mitogen-activated protein kinase.	0.537
G3NL88_GASAC	G3Q1Y1_GASAC	ENSGACP00000006101	ENSGACP00000023880	ADP-ribosylation factor-like 15a.	Mitogen-activated protein kinase.	0.537
G3NL88_GASAC	G3Q6L0_GASAC	ENSGACP00000006101	ENSGACP00000025520	ADP-ribosylation factor-like 15a.	Mitogen-activated protein kinase kinase 7.	0.495
G3NLX7_GASAC	G3NQF0_GASAC	ENSGACP00000006340	ENSGACP00000007566	Uncharacterized protein.	Mitogen-activated protein kinase.	0.748
G3NLX7_GASAC	G3NVN6_GASAC	ENSGACP00000006340	ENSGACP00000009405	Uncharacterized protein.	Mitogen-activated protein kinase.	0.748
G3NLX7_GASAC	G3P8W1_GASAC	ENSGACP00000006340	ENSGACP00000014035	Uncharacterized protein.	Si:dkey-17m8.1.	0.674
G3NLX7_GASAC	G3PVL6_GASAC	ENSGACP00000006340	ENSGACP00000021655	Uncharacterized protein.	Mitogen-activated protein kinase.	0.748
G3NLX7_GASAC	G3Q1Y1_GASAC	ENSGACP00000006340	ENSGACP00000023880	Uncharacterized protein.	Mitogen-activated protein kinase.	0.748
G3NLX7_GASAC	G3Q6L0_GASAC	ENSGACP00000006340	ENSGACP00000025520	Uncharacterized protein.	Mitogen-activated protein kinase kinase 7.	0.945
G3NLX7_GASAC	MAP2K4	ENSGACP00000006340	ENSGACP00000019084	Uncharacterized protein.	Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.	0.947
G3NQF0_GASAC	G3NL88_GASAC	ENSGACP00000007566	ENSGACP00000006101	Mitogen-activated protein kinase.	ADP-ribosylation factor-like 15a.	0.537
G3NQF0_GASAC	G3NLX7_GASAC	ENSGACP00000007566	ENSGACP00000006340	Mitogen-activated protein kinase.	Uncharacterized protein.	0.748
G3NQF0_GASAC	G3NYY9_GASAC	ENSGACP00000007566	ENSGACP00000010560	Mitogen-activated protein kinase.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.540
G3NQF0_GASAC	G3P8W1_GASAC	ENSGACP00000007566	ENSGACP00000014035	Mitogen-activated protein kinase.	Si:dkey-17m8.1.	0.728
G3NQF0_GASAC	G3PGY1_GASAC	ENSGACP00000007566	ENSGACP00000016856	Mitogen-activated protein kinase.	ADP-ribosylation factor 6a; Belongs to the small GTPase superfamily. Arf family.	0.539
G3NQF0_GASAC	G3PVL6_GASAC	ENSGACP00000007566	ENSGACP00000021655	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.796
G3NQF0_GASAC	G3Q1Y1_GASAC	ENSGACP00000007566	ENSGACP00000023880	Mitogen-activated protein kinase.	Mitogen-activated protein kinase.	0.976