STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDSSerine dehydratase. (346 aa)    
Predicted Functional Partners:
G3P4A1_GASAC
Cystathionase (cystathionine gamma-lyase), like.
  
 
 0.905
CBS
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.902
G3NKR2_GASAC
Serine--pyruvate aminotransferase.
  
 0.900
G3PKG4_GASAC
Serine--pyruvate aminotransferase.
  
 0.900
G3NEY8_GASAC
Threonine aldolase 1.
  
 
 0.897
G3PKG5_GASAC
Zgc:172121; Involved in the regulation of homocysteine metabolism.
  
 0.892
G3PRI7_GASAC
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 0.892
G3P2C2_GASAC
Phosphoserine phosphatase.
    
 0.890
G3PP48_GASAC
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.878
G3Q5S1_GASAC
Branched chain amino-acid transaminase 1, cytosolic.
  
 
 0.878
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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