STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIAO1Probable cytosolic iron-sulfur protein assembly protein CIAO1; Key component of the cytosolic iron-sulfur protein assembly (CIA) complex, a multiprotein complex that mediates the incorporation of iron-sulfur cluster into extramitochondrial Fe/S proteins. Belongs to the WD repeat CIA1 family. (335 aa)    
Predicted Functional Partners:
G3PDY9_GASAC
Cytosolic iron-sulfur assembly component 2B.
    
 0.998
G3NME7_GASAC
MMS19 homolog, cytosolic iron-sulfur assembly component.
    
 0.994
G3NZ86_GASAC
Cytosolic iron-sulfur assembly component 2A.
    
 0.986
G3NNQ5_GASAC
Nuclear prelamin A recognition factor; Belongs to the NARF family.
    
 0.915
G3PDJ7_GASAC
Nuclear prelamin A recognition factor-like; Belongs to the NARF family.
    
 0.915
G3PFN5_GASAC
Excision repair cross-complementation group 2.
    
 0.914
G3PHK7_GASAC
DNA polymerase.
    
 0.796
G3PMZ2_GASAC
Nucleotide binding protein 1 (MinD homolog, E. coli).
 
 
 0.789
NUBP2
Cytosolic Fe-S cluster assembly factor NUBP2; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NUBP1-NUBP2 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily.
 
 
 0.762
G3PI23_GASAC
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11.
    
 0.729
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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