STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PCJ5_GASACSi:zfos-452g4.1. (409 aa)    
Predicted Functional Partners:
ENY2
Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...]
    
 
 0.951
G3PXQ8_GASAC
Zgc:153681.
   
 
 0.944
G3NUE9_GASAC
SEM1 26S proteasome complex subunit.
    
 
 0.943
G3N4M1_GASAC
PCI domain containing 2.
   
 
 0.881
G3PS50_GASAC
PCI domain containing 2.
   
 
 0.881
G3NP66_GASAC
Nucleoporin 153.
    
 
 0.813
G3PGW2_GASAC
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.812
G3PSB8_GASAC
Uncharacterized protein.
    
 
 0.812
G3PWT4_GASAC
Centrin 4.
    
 
 0.812
G3Q2R8_GASAC
Centrin, EF-hand protein, 2.
    
 
 0.812
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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