STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PDG1_GASACTransmembrane protein 189. (275 aa)    
Predicted Functional Partners:
G3PBS8_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
 
 
  0.969
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.951
G3Q1E3_GASAC
Ubiquitin-conjugating enzyme E2 variant 2.
 
 
  0.949
G3PGI7_GASAC
Phospholipase A(2).
     
 0.849
G3PLQ7_GASAC
Phospholipase A(2).
     
 0.849
PLA2G1B
Phospholipase A(2).
     
 0.849
G3NJB4_GASAC
Choline/ethanolamine phosphotransferase 1b; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.848
G3NPX7_GASAC
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.848
G3Q8P4_GASAC
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.847
G3Q8N1_GASAC
Phospholipase A2, group VI (cytosolic, calcium-independent).
   
 
  0.844
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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