STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PDL3_GASACAtlastin GTPase 1. (560 aa)    
Predicted Functional Partners:
G3NKK2_GASAC
Spastin; Belongs to the AAA ATPase family.
   
 
 0.687
G3PB52_GASAC
UEV domain-containing protein.
   
 
 0.685
G3NZZ7_GASAC
Receptor expression-enhancing protein.
    
 
 0.661
G3P4X3_GASAC
Reticulon.
    
 
 0.594
G3Q262_GASAC
Receptor expression-enhancing protein.
   
 
 0.554
G3P0E4_GASAC
Reticulon.
   
 
 0.546
G3QAH9_GASAC
Reticulon.
    
 
 0.543
G3PKS9_GASAC
NIPA magnesium transporter 1.
      
 0.524
G3PBK8_GASAC
Tumor susceptibility 101a.
     
 0.522
G3PPY9_GASAC
ADP-ribosylation factor-like 6 interacting protein 1.
   
 
 0.519
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.