STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PDM9_GASACSH3 domain-containing protein. (185 aa)    
Predicted Functional Partners:
G3PTV2_GASAC
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.962
G3P7J4_GASAC
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.950
G3NJZ5_GASAC
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
    
 0.949
G3NAN3_GASAC
Isopentenyl-diphosphate delta isomerase 1.
  
 
 0.944
G3PK37_GASAC
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.901
G3NN60_GASAC
Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.
    
 0.897
G3PH03_GASAC
Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.
    
 0.894
G3P2W5_GASAC
Radical S-adenosyl methionine domain containing 2.
     
 0.888
G3NIV3_GASAC
NUS1 dehydrodolichyl diphosphate synthase subunit.
  
 
 0.883
G3Q4A7_GASAC
Farnesyltransferase, CAAX box, alpha.
     
 0.883
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.