STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PGJ1_GASACWD repeat domain 48b. (677 aa)    
Predicted Functional Partners:
G3NUR3_GASAC
Ubiquitin carboxyl-terminal hydrolase.
    
 0.998
G3PCM8_GASAC
FA complementation group I.
    
 0.986
G3QA52_GASAC
Ubiquitin B.
    
 0.974
G3NFJ7_GASAC
Ubiquitin specific peptidase 12a; Belongs to the peptidase C19 family.
    
 0.966
G3PME4_GASAC
Ubiquitin specific peptidase 46; Belongs to the peptidase C19 family.
    
 0.966
G3Q4E2_GASAC
Ubiquitin specific peptidase 12b; Belongs to the peptidase C19 family.
    
 0.966
G3P8Y0_GASAC
WD repeat domain 20a.
    
 0.964
DMWD
DM1 locus, WD repeat containing.
    
 0.964
G3PCG6_GASAC
Ribosomal protein S27a.
    
 0.961
G3PHC8_GASAC
WD repeat domain 20b.
    
 0.960
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.