STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PGN8_GASACRhomboid domain containing 1. (341 aa)    
Predicted Functional Partners:
G3P597_GASAC
Valosin containing protein; Belongs to the AAA ATPase family.
    
 
 0.900
G3Q4U8_GASAC
Zgc:136908; Belongs to the AAA ATPase family.
    
 
 0.900
SPATA5
Spermatogenesis associated 5.
    
 
 0.739
G3PX92_GASAC
Spermatogenesis associated 5-like 1.
    
 
 0.739
G3NGK2_GASAC
Phosphatidylinositol glycan anchor biosynthesis, class A.
   
 
  0.721
G3QA36_GASAC
Phosphatidylinositol-glycan biosynthesis class W protein; Probable acetyltransferase, which acetylates the inositol ring of phosphatidylinositol during biosynthesis of GPI-anchor.
   
 
  0.721
G3PM83_GASAC
Cyclin D1; Belongs to the cyclin family.
      
 0.593
G3N951_GASAC
Popeye domain containing 2.
    
 
 0.555
G3NSV5_GASAC
Kelch-like family member 31.
      
 0.554
G3PQ37_GASAC
ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase.
   
 
  0.531
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.