STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PH48_GASACPotassium channel, subfamily V, member 2b; Belongs to the potassium channel family. (463 aa)    
Predicted Functional Partners:
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.970
G3PQX4_GASAC
Ribosomal protein L31.
   
 0.890
G3NHE9_GASAC
Ribosomal protein L30.
  
 0.888
G3NH71_GASAC
Ribosomal protein L35.
  
 0.885
G3NVH0_GASAC
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.885
G3QBL6_GASAC
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.884
G3NG11_GASAC
Ribosomal protein L24.
  
 0.883
G3NDY7_GASAC
Uncharacterized protein.
  
 0.881
G3NLJ0_GASAC
Ribosomal protein L35a.
   
 0.879
G3PZQ5_GASAC
Ribosomal protein L36A; Belongs to the eukaryotic ribosomal protein eL42 family.
  
 0.873
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.