STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PHF4_GASACIslet cell autoantigen 1. (459 aa)    
Predicted Functional Partners:
G3NX34_GASAC
Protein interacting with prkca 1.
    
 
 0.710
G3PPZ0_GASAC
RAB2A, member RAS oncogene family.
    
 
 0.671
G3PS03_GASAC
DnaJ (Hsp40) homolog, subfamily C, member 27.
    
 
 0.514
G3Q8N1_GASAC
Phospholipase A2, group VI (cytosolic, calcium-independent).
 
 
    0.508
RUNDC1
RUN domain containing 1.
    
 
 0.462
G3PXK8_GASAC
Small G protein signaling modulator 1b.
   
 
 0.445
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.