G3PI31_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3PI31_GASAC

Guanine nucleotide binding protein (G protein), beta polypeptide 1-like. (334 aa)

Predicted Functional Partners:

G3N9U6_GASAC

0.824

G3PLL3_GASAC

0.812

G3NAI4_GASAC

0.811

G3NT44_GASAC

0.810

G3P0L7_GASAC

0.804

G3P2Z1_GASAC

0.803

G3NB61_GASAC

0.802

G3NKQ0_GASAC

0.802

G3PUL6_GASAC

0.801

G3QAL9_GASAC

0.801

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3N9U6_GASAC	G3NB61_GASAC	ENSGACP00000002087	ENSGACP00000002557	MAD2 mitotic arrest deficient-like 1 (yeast).	Cell division cycle 16 homolog (S. cerevisiae).	0.996
G3N9U6_GASAC	G3PI31_GASAC	ENSGACP00000002087	ENSGACP00000017258	MAD2 mitotic arrest deficient-like 1 (yeast).	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.	0.824
G3NAI4_GASAC	G3NKQ0_GASAC	ENSGACP00000002329	ENSGACP00000005913	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
G3NAI4_GASAC	G3NT44_GASAC	ENSGACP00000002329	ENSGACP00000008512	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.999
G3NAI4_GASAC	G3PI31_GASAC	ENSGACP00000002329	ENSGACP00000017258	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.	0.811
G3NAI4_GASAC	G3PLL3_GASAC	ENSGACP00000002329	ENSGACP00000018494	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
G3NAI4_GASAC	G3QAL9_GASAC	ENSGACP00000002329	ENSGACP00000026935	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit.	0.999
G3NB61_GASAC	G3N9U6_GASAC	ENSGACP00000002557	ENSGACP00000002087	Cell division cycle 16 homolog (S. cerevisiae).	MAD2 mitotic arrest deficient-like 1 (yeast).	0.996
G3NB61_GASAC	G3PI31_GASAC	ENSGACP00000002557	ENSGACP00000017258	Cell division cycle 16 homolog (S. cerevisiae).	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.	0.802
G3NKQ0_GASAC	G3NAI4_GASAC	ENSGACP00000005913	ENSGACP00000002329	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
G3NKQ0_GASAC	G3NT44_GASAC	ENSGACP00000005913	ENSGACP00000008512	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	0.999
G3NKQ0_GASAC	G3PI31_GASAC	ENSGACP00000005913	ENSGACP00000017258	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.	0.802
G3NKQ0_GASAC	G3PLL3_GASAC	ENSGACP00000005913	ENSGACP00000018494	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
G3NKQ0_GASAC	G3QAL9_GASAC	ENSGACP00000005913	ENSGACP00000026935	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	Transcription initiation factor TFIID subunit.	0.999
G3NT44_GASAC	G3NAI4_GASAC	ENSGACP00000008512	ENSGACP00000002329	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
G3NT44_GASAC	G3NKQ0_GASAC	ENSGACP00000008512	ENSGACP00000005913	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
G3NT44_GASAC	G3PI31_GASAC	ENSGACP00000008512	ENSGACP00000017258	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.	0.810
G3NT44_GASAC	G3PLL3_GASAC	ENSGACP00000008512	ENSGACP00000018494	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.999
G3NT44_GASAC	G3QAL9_GASAC	ENSGACP00000008512	ENSGACP00000026935	Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.	Transcription initiation factor TFIID subunit.	0.999
G3P0L7_GASAC	G3PI31_GASAC	ENSGACP00000011140	ENSGACP00000017258	Intraflagellar transport 140 homolog (Chlamydomonas).	Guanine nucleotide binding protein (G protein), beta polypeptide 1-like.	0.804