STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PIC5_GASACTNFR-Cys domain-containing protein. (156 aa)    
Predicted Functional Partners:
G3PNT3_GASAC
Ig-like domain-containing protein.
   
 0.985
G3PJ97_GASAC
Tumor necrosis factor b (TNF superfamily, member 2).
   
 0.943
G3PYU6_GASAC
CD40 ligand; Belongs to the tumor necrosis factor family.
   
 0.936
G3PWU5_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.934
G3NNR0_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.933
G3PTC4_GASAC
TNF receptor-associated factor.
    
 0.933
G3NK41_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.926
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.926
G3N5N7_GASAC
TNF_2 domain-containing protein.
   
 0.841
G3NCY6_GASAC
Uncharacterized protein.
   
 0.670
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.