STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PID2_GASACUncharacterized protein. (248 aa)    
Predicted Functional Partners:
G3PB14_GASAC
Nucleolar protein 9.
   
 0.957
G3PB16_GASAC
Uncharacterized protein.
   
 0.954
G3PJ85_GASAC
WD repeat domain 18.
   
 0.933
G3P2Z1_GASAC
Testis expressed 10.
   
 0.916
G3N6N2_GASAC
RIX1 domain-containing protein.
   
 0.884
G3NNK8_GASAC
IMP U3 small nucleolar ribonucleoprotein 4.
   
 
  0.812
G3NWB4_GASAC
SUMO specific peptidase 5.
   
 0.806
G3PUE9_GASAC
Uncharacterized protein.
   
 0.806
G3Q9F0_GASAC
SUMO specific peptidase 3b.
   
 0.806
BOP1
Ribosome biogenesis protein BOP1; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.802
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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