STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPTC7Protein phosphatase; Belongs to the PP2C family. (297 aa)    
Predicted Functional Partners:
G3P6X5_GASAC
TGF-beta activated kinase 1 (MAP3K7) binding protein 3.
   
 0.699
G3NTV9_GASAC
TGF-beta activated kinase 1 (MAP3K7) binding protein 2.
   
 0.678
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.661
G3PIJ0_GASAC
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.651
G3Q620_GASAC
Optineurin.
    
 0.651
G3NIP4_GASAC
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.649
G3NNI6_GASAC
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.649
G3PME9_GASAC
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.636
G3Q6L0_GASAC
Mitogen-activated protein kinase kinase 7.
    
 0.617
G3NC49_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.601
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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