STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PJZ4_GASACTetratricopeptide repeat domain 38. (470 aa)    
Predicted Functional Partners:
G3Q5J0_GASAC
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
 
    
 0.593
G3PCS1_GASAC
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
    0.451
G3PVG6_GASAC
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
      
 0.440
G3NQ42_GASAC
Zinc finger, CCHC domain containing 17.
      
 0.434
G3NPI1_GASAC
PKS_ER domain-containing protein.
   
    0.420
G3PJK5_GASAC
Si:ch73-21k16.5; Belongs to the GPAT/DAPAT family.
   
    0.414
G3Q111_GASAC
Haloacid dehalogenase-like hydrolase domain containing 2.
   
  
 0.407
G3Q615_GASAC
Phytanoyl-CoA 2-hydroxylase.
   
  
 0.401
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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