STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PL97_GASACKeratin, type 1, gene c5; Belongs to the intermediate filament family. (426 aa)    
Predicted Functional Partners:
G3Q9Z5_GASAC
FinTRIM family, member 83.
  
    0.647
G3NI06_GASAC
Occludin b.
   
  
 0.479
G3PIA1_GASAC
Suppressor of tumorigenicity 14 protein homolog; Degrades extracellular matrix.
   
    0.454
G3N596_GASAC
Occludin a.
   
    0.453
G3N6D2_GASAC
SVOP-like.
   
    0.453
G3NE29_GASAC
Zgc:101785.
   
    0.453
G3NK24_GASAC
Uncharacterized protein.
   
    0.453
G3NKG0_GASAC
Periplakin.
   
    0.453
G3NLK1_GASAC
Uncharacterized protein.
   
    0.453
G3NT31_GASAC
Fucosyltransferase 9b.
   
    0.453
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.