STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PM17_GASACMitochondrial rRNA methyltransferase 2. (236 aa)    
Predicted Functional Partners:
G3PKR4_GASAC
NOP58 ribonucleoprotein homolog (yeast).
  
 0.971
G3PZV9_GASAC
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.960
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.954
G3NQJ9_GASAC
WD repeat domain 6.
   
 
 0.943
G3PTP0_GASAC
NSA2 ribosome biogenesis homolog (S. cerevisiae).
  
 
 0.941
WDR12
Ribosome biogenesis protein WDR12; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.939
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.938
G3NRQ6_GASAC
Ribosomal L24 domain containing 1.
   
 
 0.935
G3NM70_GASAC
WD repeat domain 74.
   
 
 0.927
G3NUK0_GASAC
EBNA1 binding protein 2.
   
 
 0.923
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.