STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIM1SIM bHLH transcription factor 1a. (749 aa)    
Predicted Functional Partners:
G3PCY4_GASAC
Aryl hydrocarbon receptor nuclear translocator.
    
 
0.800
G3PLE6_GASAC
Aryl-hydrocarbon receptor nuclear translocator 2.
    
 
0.800
G3NCZ4_GASAC
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 
0.572
G3Q688_GASAC
Uncharacterized protein.
   
 
0.572
G3QAG1_GASAC
Neuronal PAS domain protein 2.
    
 
0.572
G3NUA2_GASAC
Nuclear receptor coactivator 1.
   
 
0.569
G3NEF1_GASAC
Nuclear receptor coactivator.
    
 
0.567
G3P6N9_GASAC
Nuclear receptor coactivator 3.
    
 
0.567
G3PR38_GASAC
BHLH domain-containing protein.
    
 
 0.567
G3PTV3_GASAC
Clock circadian regulator b.
    
 
0.567
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.