STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PML7_GASACX-box binding protein 1. (381 aa)    
Predicted Functional Partners:
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.938
G3NTA0_GASAC
Uncharacterized protein.
   
 0.937
G3PD00_GASAC
Endoplasmic reticulum to nucleus signaling 1.
    
 0.922
G3PWV0_GASAC
Endoplasmic reticulum to nucleus signaling 2.
    
 0.922
G3PD06_GASAC
Activating transcription factor 6.
    
 0.886
G3PA81_GASAC
TBP-like 1.
   
 
 0.867
G3NBG2_GASAC
Ribosomal protein L8.
    
  0.836
G3P5J8_GASAC
BZIP domain-containing protein.
    
 0.832
G3P5K2_GASAC
Uncharacterized protein.
    
 0.832
G3NIQ2_GASAC
TATA box binding protein like 2.
   
 
 0.821
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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