STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PMW9_GASACUncharacterized protein. (193 aa)    
Predicted Functional Partners:
G3PJ85_GASAC
WD repeat domain 18.
   
 0.721
G3P2Z1_GASAC
Testis expressed 10.
    
 0.654
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.645
G3Q6Z5_GASAC
Rhomboid-related protein 3; May be involved in regulated intramembrane proteolysis and the subsequent release of functional polypeptides from their membrane anchors; Belongs to the peptidase S54 family.
    
  0.640
G3NHE9_GASAC
Ribosomal protein L30.
    
 0.619
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  0.606
G3Q9X3_GASAC
Receptor-interacting serine-threonine kinase 4.
   
 0.602
G3Q1R2_GASAC
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
  0.581
G3QCM9_GASAC
Ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
  0.581
G3PTZ5_GASAC
Centromere protein N.
    
 0.573
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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