STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PQ07_GASACR3H domain containing 1. (1018 aa)    
Predicted Functional Partners:
G3P5A8_GASAC
Ubiquinol-cytochrome c reductase core protein 1.
    
 
 0.497
G3Q733_GASAC
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
    
 
 0.497
G3PS45_GASAC
Uncharacterized protein.
   
 
  0.495
G3PFY0_GASAC
RAB, member of RAS oncogene family-like 2.
   
 
  0.482
G3PV41_GASAC
Ring finger protein 130.
    
 
 0.480
G3PDG5_GASAC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.445
G3N9Q4_GASAC
Bassoon (presynaptic cytomatrix protein) b.
   
   0.442
G3Q3W5_GASAC
RNA polymerase I and III subunit D.
    
 
 0.419
G3PIK1_GASAC
EH-domain containing 3; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
  0.407
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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