STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PQS4_GASACWD repeat domain 47a. (931 aa)    
Predicted Functional Partners:
G3Q8P5_GASAC
Uncharacterized protein.
 
 
 
 0.709
G3P267_GASAC
Calmodulin regulated spectrin-associated protein family, member 2a.
 
 
 
 0.679
G3PQR3_GASAC
Calmodulin regulated spectrin-associated protein family, member 2b.
 
 
 
 0.676
G3P6E6_GASAC
Calmodulin regulated spectrin-associated protein family, member 3.
 
  
 
 0.666
G3PUC8_GASAC
Calmodulin regulated spectrin-associated protein 1a.
 
 
 
 0.582
G3PLI9_GASAC
Calmodulin regulated spectrin-associated protein 1b.
 
  
 
 0.555
G3PFQ9_GASAC
F-box protein 33.
      
 0.526
G3PN32_GASAC
WD repeat domain 78.
      
 0.522
G3PW35_GASAC
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
  
 0.505
WDR63
WD repeat domain 63.
      
 0.491
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.