STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PQT2_GASAC5-aminolevulinate synthase. (605 aa)    
Predicted Functional Partners:
G3Q1V4_GASAC
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.909
G3PZF6_GASAC
Sarcosine dehydrogenase.
  
 
 0.894
G3PKL3_GASAC
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.881
G3NEY8_GASAC
Threonine aldolase 1.
    
 0.876
G3NT37_GASAC
Serine hydroxymethyltransferase 2 (mitochondrial).
  
 
 0.870
G3NYA3_GASAC
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 
 0.870
G3NKR2_GASAC
Serine--pyruvate aminotransferase.
    
 0.867
G3PKG4_GASAC
Serine--pyruvate aminotransferase.
    
 0.867
G3P299_GASAC
D-amino-acid oxidase, tandem duplicate 2.
    
 0.859
G3PKG8_GASAC
Pipecolic acid oxidase.
    
 0.859
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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