STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PR12_GASACWD repeat, sterile alpha motif and U-box domain containing 1. (471 aa)    
Predicted Functional Partners:
G3PQA7_GASAC
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.996
G3P895_GASAC
Tetratricopeptide repeat domain 37.
    
 0.906
G3NET3_GASAC
SKI2 homolog, superkiller viralicidic activity 2-like.
    
 0.900
G3P9Q5_GASAC
PAF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.864
G3PUG5_GASAC
Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae).
    
 0.824
CDC73
CDC73_N domain-containing protein.
    
 0.824
G3N4M7_GASAC
Uncharacterized protein.
   
 0.811
G3PYM2_GASAC
Damage-specific DNA binding protein 1.
    
 0.805
G3PV23_GASAC
Mtr4 exosome RNA helicase.
    
 0.795
G3NKA0_GASAC
Cyclin-dependent kinase 2 interacting protein.
    
 0.789
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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