STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUGP1SURP and G-patch domain containing 1. (638 aa)    
Predicted Functional Partners:
G3Q648_GASAC
RNA binding motif protein 17.
   
 
 0.973
DHX15
DEAH-box helicase 15.
    
 0.959
G3Q7K1_GASAC
DEAH (Asp-Glu-Ala-His) box helicase 15.
    
 0.959
G3P8Z0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.919
G3PNF0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.919
G3N740_GASAC
Uncharacterized protein.
   
0.851
G3P6C6_GASAC
RNA binding motif protein 10.
   
 0.851
G3P8B8_GASAC
RNA binding motif protein 5.
   
0.851
G3P8T5_GASAC
OCRE domain-containing protein.
   
 0.851
G3P8U1_GASAC
C2H2-type domain-containing protein.
   
 0.851
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.