STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCDH20Protocadherin 20. (872 aa)    
Predicted Functional Partners:
G3PR88_GASAC
Uncharacterized protein.
 
  
 0.831
G3PBS7_GASAC
Four-jointed box kinase 1.
   
 0.791
LIX1L
Limb and CNS expressed 1 like.
   
 0.678
G3P5J1_GASAC
Limb and CNS expressed 1.
   
 0.678
G3N9H3_GASAC
Arginine-glutamic acid dipeptide (RE) repeats b.
    
 0.640
G3NWT1_GASAC
Arginine-glutamic acid dipeptide (RE) repeats a.
    
 0.640
G3P6J8_GASAC
Uncharacterized protein.
    
 0.640
G3NR15_GASAC
FERM domain-containing protein.
    
 0.616
G3NRZ4_GASAC
FERM domain-containing protein.
    
 0.616
G3PE62_GASAC
FERM domain containing 6.
    
 0.616
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.