STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PRI6_GASACAnkyrin repeat domain 10a. (360 aa)    
Predicted Functional Partners:
G3PJH0_GASAC
Intraflagellar transport 81 homolog.
    
 0.726
G3N915_GASAC
Intraflagellar transport 88 homolog.
   
 0.711
G3PYQ9_GASAC
Intraflagellar transport 22 homolog (Chlamydomonas).
    
 0.708
G3P9M1_GASAC
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.707
G3PQ47_GASAC
Fleer.
    
 0.701
G3PJC8_GASAC
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 0.696
G3PTB5_GASAC
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.692
G3NT96_GASAC
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.646
G3NC49_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.643
G3P714_GASAC
Uncharacterized protein.
   
 0.640
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.