STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PABPN1LPoly(A) binding protein nuclear 1 like, cytoplasmic. (269 aa)    
Predicted Functional Partners:
G3PZ46_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 2.
  
0.963
G3PLW5_GASAC
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 0.943
G3Q963_GASAC
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.939
G3PII4_GASAC
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
  
 0.931
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
    
 0.917
G3PFS1_GASAC
Pinin, desmosome associated protein.
   
 0.906
G3PTV6_GASAC
FIP1 like 1b (S. cerevisiae).
   
 0.905
G3PLU1_GASAC
Apoptotic chromatin condensation inducer 1a.
   
 0.891
G3Q668_GASAC
Uncharacterized protein.
   
 0.891
G3Q669_GASAC
Uncharacterized protein.
   
 0.891
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.