STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTBP3Polypyrimidine tract binding protein 3. (518 aa)    
Predicted Functional Partners:
G3ND78_GASAC
Uncharacterized protein.
   
0.787
G3PFB4_GASAC
Heterogeneous nuclear ribonucleoprotein L2.
   
0.787
G3Q7P1_GASAC
RRM domain-containing protein.
   
0.787
G3Q9S3_GASAC
RRM domain-containing protein.
   
0.787
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.767
G3NXK6_GASAC
Heterogeneous nuclear ribonucleoprotein K.
   
 0.755
G3PUV4_GASAC
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.755
SRSF3
Serine and arginine rich splicing factor 3b.
   
 
 0.712
G3NKU2_GASAC
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.710
G3P4B9_GASAC
Uncharacterized protein.
   
 0.710
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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