STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PSQ3_GASACTubby-like protein; Belongs to the TUB family. (496 aa)    
Predicted Functional Partners:
G3NPC7_GASAC
Tetratricopeptide repeat domain 21B.
    
 0.845
G3NF16_GASAC
Uncharacterized protein.
    
 0.836
G3PUL6_GASAC
WD repeat domain 19.
    
 0.834
G3P0L7_GASAC
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.829
G3PHR0_GASAC
WD repeat-containing protein 35.
   
 0.823
G3NG53_GASAC
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
     
 0.701
SST
Somatostatin 1.
   
 
  0.618
G3NUS9_GASAC
Neuropeptide Y.
   
 
  0.618
G3PBV0_GASAC
Protein kinase, cAMP-dependent, regulatory, type I, beta.
   
  0.585
IFT43
Intraflagellar transport 43.
    
 
 0.571
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.