STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PTH4_GASACE3 ubiquitin-protein ligase. (913 aa)    
Predicted Functional Partners:
G3PCG6_GASAC
Ribosomal protein S27a.
    
 0.935
G3QA52_GASAC
Ubiquitin B.
    
 0.905
G3PYF8_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.896
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.887
G3NJ56_GASAC
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
    
 0.880
G3N7Y3_GASAC
MDM2 proto-oncogene; Belongs to the MDM2/MDM4 family.
    
 0.878
G3PYD8_GASAC
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
    
  0.867
G3P8B4_GASAC
Arrestin domain containing 3a.
    
 
 0.857
G3NCN1_GASAC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.849
G3NRR0_GASAC
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.849
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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