STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PTZ7_GASACZgc:101679. (318 aa)    
Predicted Functional Partners:
G3Q318_GASAC
Huntingtin.
    
 
 0.918
G3NI85_GASAC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
      
 0.594
G3NIM1_GASAC
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
      
 0.594
G3NNT5_GASAC
ATP-binding cassette, sub-family B (MDR/TAP), member 11a.
    
 
 0.555
G3P3W3_GASAC
ATP-binding cassette, sub-family B (MDR/TAP), member 4.
    
 
 0.555
G3PLC2_GASAC
ATP-binding cassette, sub-family B (MDR/TAP), member 11b.
    
 
 0.555
G3QBN1_GASAC
Mannosyltransferase.
    
 
 0.555
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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