STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PU16_GASACFamily with sequence similarity 78 member Ba. (281 aa)    
Predicted Functional Partners:
G3Q7Q6_GASAC
Malate synthase-like.
  
 
  0.843
G3PM80_GASAC
Cytochrome b5 reductase 4.
   
 0.810
G3PHC0_GASAC
WD repeat domain 43.
   
 0.770
G3PLU0_GASAC
UTP4 small subunit processome component.
    
 0.750
G3NDZ3_GASAC
WD repeat domain 75.
   
  0.738
G3Q5U5_GASAC
UTP20 small subunit processome component.
   
 0.709
G3NKA3_GASAC
UTP15 small subunit processome component.
   
 0.703
NRXN2
Neurexin 2.
   
 0.700
G3QBP7_GASAC
Uncharacterized protein.
   
 0.700
G3NE14_GASAC
Neurexin 1.
    
 0.698
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.