STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PU29_GASACSEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family. (215 aa)    
Predicted Functional Partners:
G3PXV3_GASAC
Syntaxin 5A; Belongs to the syntaxin family.
   
 0.993
G3PM97_GASAC
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.991
G3NSE4_GASAC
Bet1 golgi vesicular membrane trafficking protein.
   
 0.985
G3P074_GASAC
Syntaxin 18.
   
 0.984
G3QAY9_GASAC
BCL2 interacting protein 1b.
   
 0.977
G3P8E1_GASAC
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
   
 0.971
G3NKG4_GASAC
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family.
    
 0.968
G3PHK9_GASAC
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.967
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
    
 0.964
G3NJI4_GASAC
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.934
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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