STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PVP6_GASACCollagen and calcium binding EGF domains 1. (394 aa)    
Predicted Functional Partners:
G3PVJ6_GASAC
Vascular endothelial growth factor c; Belongs to the PDGF/VEGF growth factor family.
    
 0.694
il1b
Interleukin-1.
    
 0.666
G3Q1B8_GASAC
Complement component 6.
    
  0.664
G3PQR2_GASAC
Vascular endothelial growth factor D; Belongs to the PDGF/VEGF growth factor family.
    
 0.639
G3PRT3_GASAC
CD59 molecule (CD59 blood group).
    
  0.623
G3N8T7_GASAC
Ig-like domain-containing protein.
    
  0.622
G3N8T9_GASAC
Uncharacterized protein.
    
  0.622
G3N8U3_GASAC
Uncharacterized protein.
    
  0.622
G3N8U6_GASAC
Uncharacterized protein.
    
  0.622
G3PTI9_GASAC
DAB adaptor protein 2.
   
 0.587
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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