STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1375 aa)    
Predicted Functional Partners:
G3Q5V9_GASAC
GP1 homolog, RAB6A GEF complex partner 1.
    
 0.996
G3NHU8_GASAC
RAB6B, member RAS oncogene family a.
   
 0.917
G3Q025_GASAC
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.916
G3PKK8_GASAC
Uncharacterized protein.
    
 0.914
G3PYH9_GASAC
RAB41, member RAS oncogene family.
    
 0.914
G3QAJ0_GASAC
RAB6A, member RAS oncogene family.
    
 0.914
G3Q7G7_GASAC
RAB33B, member RAS oncogene family a.
    
 0.890
G3PP64_GASAC
RAB36, member RAS oncogene family.
   
 0.886
G3PB59_GASAC
RAB34, member RAS oncogene family a.
    
 0.883
G3QB58_GASAC
RAB34, member RAS oncogene family b.
    
 0.883
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.