STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PXD4_GASACRegulatory factor X, 3 (influences HLA class II expression). (761 aa)    
Predicted Functional Partners:
G3P9I1_GASAC
FHA domain-containing protein.
   
 0.919
G3QBB8_GASAC
Regulatory factor X-associated protein.
    
 0.853
G3P9P8_GASAC
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.841
G3PIA9_GASAC
Regulatory factor X-associated ankyrin-containing protein.
    
 0.778
G3PTG1_GASAC
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.753
G3PCK4_GASAC
Doublecortin-like kinase 1b.
   
 
 0.642
G3QBB6_GASAC
Doublecortin-like kinase 1a.
     
 0.633
G3P3J2_GASAC
Tonsoku-like, DNA repair protein.
    
  0.632
G3NKL4_GASAC
Forkhead box J1b.
    
 
 0.601
G3PPV4_GASAC
Fork-head domain-containing protein.
    
 
 0.601
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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