STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PXU4_GASACSEC62 homolog, preprotein translocation factor. (400 aa)    
Predicted Functional Partners:
G3PAS8_GASAC
SEC63 homolog, protein translocation regulator.
   
 0.999
G3P2T7_GASAC
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.965
G3N700_GASAC
Plug_translocon domain-containing protein.
   
 
 0.952
G3P5M5_GASAC
Plug_translocon domain-containing protein.
   
 
 0.952
G3PC73_GASAC
Small nuclear ribonucleoprotein 200 (U5).
     
 0.930
G3NH39_GASAC
OSR1_C domain-containing protein.
    
 
 0.911
G3NP20_GASAC
Serine threonine kinase 39.
    
 
 0.911
G3PGR2_GASAC
Oxidative stress responsive kinase 1a.
    
 
 0.911
G3P5N0_GASAC
STE20 related adaptor alpha.
    
 
 0.875
STRADB
STE20 related adaptor beta.
    
 
 0.875
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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