G3PYQ5_GASAC protein (Gasterosteus aculeatus)

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[Homology]

Score

G3PYQ5_GASAC

LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated. (80 aa)

Predicted Functional Partners:

LSM3

0.999

G3NI70_GASAC

0.999

LSM5

0.999

LSM4

0.999

G3P804_GASAC

0.999

LSM1

0.999

G3PVT1_GASAC

0.999

G3NU46_GASAC

0.998

G3PA33_GASAC

0.996

SART1

0.996

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NI70_GASAC	G3NU46_GASAC	ENSGACP00000005030	ENSGACP00000008864	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D2.	0.999
G3NI70_GASAC	G3P804_GASAC	ENSGACP00000005030	ENSGACP00000013728	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
G3NI70_GASAC	G3PA33_GASAC	ENSGACP00000005030	ENSGACP00000014457	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.998
G3NI70_GASAC	G3PVT1_GASAC	ENSGACP00000005030	ENSGACP00000021720	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PAT1 homolog 1, processing body mRNA decay factor.	0.999
G3NI70_GASAC	G3PYQ5_GASAC	ENSGACP00000005030	ENSGACP00000022745	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
G3NI70_GASAC	LSM1	ENSGACP00000005030	ENSGACP00000015561	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
G3NI70_GASAC	LSM3	ENSGACP00000005030	ENSGACP00000004564	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3NI70_GASAC	LSM4	ENSGACP00000005030	ENSGACP00000010798	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3NI70_GASAC	LSM5	ENSGACP00000005030	ENSGACP00000007320	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
G3NI70_GASAC	SART1	ENSGACP00000005030	ENSGACP00000022394	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.997
G3NU46_GASAC	G3NI70_GASAC	ENSGACP00000008864	ENSGACP00000005030	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3NU46_GASAC	G3P804_GASAC	ENSGACP00000008864	ENSGACP00000013728	Small nuclear ribonucleoprotein Sm D2.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
G3NU46_GASAC	G3PA33_GASAC	ENSGACP00000008864	ENSGACP00000014457	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
G3NU46_GASAC	G3PYQ5_GASAC	ENSGACP00000008864	ENSGACP00000022745	Small nuclear ribonucleoprotein Sm D2.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.998
G3NU46_GASAC	LSM1	ENSGACP00000008864	ENSGACP00000015561	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.808
G3NU46_GASAC	LSM3	ENSGACP00000008864	ENSGACP00000004564	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.995
G3NU46_GASAC	LSM4	ENSGACP00000008864	ENSGACP00000010798	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.995
G3NU46_GASAC	LSM5	ENSGACP00000008864	ENSGACP00000007320	Small nuclear ribonucleoprotein Sm D2.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.996
G3NU46_GASAC	SART1	ENSGACP00000008864	ENSGACP00000022394	Small nuclear ribonucleoprotein Sm D2.	Spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP.	0.995
G3P804_GASAC	G3NI70_GASAC	ENSGACP00000013728	ENSGACP00000005030	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999